Metabarcoding Analysis of Harmful Algal Bloom Species in the Western Pacific Seamount Regions

doi:10.3390/ijerph182111470

	Metabarcoding Analysis of Harmful Algal Bloom Species in the Western Pacific Seamount Regions
	Xu, Qing 1,2,3,4; Wang, Chunzhi 1,2,3; Xu, Kuidong3,5,6 ; Chen, Nansheng 1,2,3,7
	2021-11-01
发表期刊	INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH
卷号	18 期号:21 页码:17
通讯作者	Chen, Nansheng(chenn@qdio.ac.cn)
摘要	The Western Pacific is the most oligotrophic sea on Earth, with numerous seamounts. However, the plankton diversity and biogeography of the Western Pacific in general and the seamount regions in particular remains largely unexplored. In this project, we quantitatively analyzed the composition and distribution patterns of plankton species in the Western Pacific seamount regions by applying metabarcoding analysis. We identified 4601 amplicon sequence variants (ASVs) representing 34 classes in seven protist phyla/divisions in the Western Pacific seamount regions, among which Dinoflagellata was by far the most dominant division. Among the 336 annotated phytoplankton species (including species in Dinoflagellata), we identified 36 harmful algal bloom (HAB) species, many of which displayed unique spatial distribution patterns in the Western Pacific seamount regions. This study was the first attempt in applying ASV-based metabarcoding analysis in studying phytoplankton and HAB species in the Western Pacific seamount regions, which may facilitate further research on the potential correlation between HABs in the Western Pacific seamount regions and coastal regions.
关键词	harmful algal bloom species (HABs) metabarcoding amplicon sequence variant (ASV) Western Pacific seamount regions
DOI	10.3390/ijerph182111470
收录类别	SCI
语种	英语
资助项目	Strategic Priority Research Program of the Chinese Academy of Sciences[XDB42000000] ; Chinese Academy of Sciences Pioneer Hundred Talents Program ; Taishan Scholar Project Special Fund ; Qingdao Innovation and Creation Plan (Talent Development Program-5th Annual Pioneer and Innovator Leadership Award)[19-3-2-16-zhc] ; Science & Technology Basic Resources Investigation Program of China[2017FY100804]
WOS研究方向	Environmental Sciences & Ecology ; Public, Environmental & Occupational Health
WOS类目	Environmental Sciences ; Public, Environmental & Occupational Health
WOS记录号	WOS:000718716200001
出版者	MDPI
引用统计	被引频次：6[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/177237
专题	海洋生态与环境科学重点实验室海洋生物分类与系统演化实验室
通讯作者	Chen, Nansheng
作者单位	1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao 266071, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao 266237, Peoples R China 3.Chinese Acad Sci, Ctr Ocean Megasci, Qingdao 266071, Peoples R China 4.Huazhong Agr Univ, Coll Life Sci & Technol, Wuhan 430070, Peoples R China 5.Chinese Acad Sci, Inst Oceanol, Lab Marine Organism Taxon & Phylogeny, Qingdao 266071, Peoples R China 6.Univ Chinese Acad Sci, Coll Marine Sci, Beijing 100049, Peoples R China 7.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC V5A 1S6, Canada
第一作者单位	海洋生态与环境科学重点实验室; 中国科学院海洋大科学研究中心
通讯作者单位	海洋生态与环境科学重点实验室; 中国科学院海洋大科学研究中心
推荐引用方式 GB/T 7714	Xu, Qing,Wang, Chunzhi,Xu, Kuidong,et al. Metabarcoding Analysis of Harmful Algal Bloom Species in the Western Pacific Seamount Regions[J]. INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH,2021,18(21):17.
APA	Xu, Qing,Wang, Chunzhi,Xu, Kuidong,&Chen, Nansheng.(2021).Metabarcoding Analysis of Harmful Algal Bloom Species in the Western Pacific Seamount Regions.INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH,18(21),17.
MLA	Xu, Qing,et al."Metabarcoding Analysis of Harmful Algal Bloom Species in the Western Pacific Seamount Regions".INTERNATIONAL JOURNAL OF ENVIRONMENTAL RESEARCH AND PUBLIC HEALTH 18.21(2021):17.

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文件名称/大小	文献类型	版本类型	开放类型	使用许可
ijerph-18-11470-v3.p（22760KB）	期刊论文	出版稿	限制开放	CC BY-NC-SA	浏览