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Effect of domestication on the genetic diversity and structure of Saccharina japonica populations in China
Zhang, Jie1,2,3; Wang, Xiuliang1,2; Yao, Jianting1,2; Li, Qiuying1,2,3; Liu, Fuli4; Yotsukura, Norishige5; Krupnova, Tatiana N.6; Duan, Delin1,2
2017-02-08
Source PublicationSCIENTIFIC REPORTS
Volume7
SubtypeArticle
AbstractSaccharina japonica is a commercially and ecologically important seaweed and is an excellent system for understanding the effects of domestication on marine crops. In this study, we used 19 selected simple sequence repeat (SSR) markers to investigate the influence of domestication on the genetic diversity and structure of S. japonica populations. Wild kelp populations exhibited higher genetic diversity than cultivated populations based on total N-A, H-E, H-O, N-P and A(R). Discriminant analysis of principal components (DAPC), a neighbour-joining (NJ) tree and STRUCTURE analyses indicated that S. japonica populations could be divided into two groups (a cultivated/introduced group and a wild indigenous group) with significant genetic differentiation (P < 0.0001). Divergent selection, continuous inbreeding and inter-specific hybridization have caused the divergence of these two genetically separate gene pools. The significant genetic differentiation between northern and southern cultivated populations appears to be due to inter-specific hybridization and wild germplasm introduction during the domestication process. In addition, the cultivation of S. japonica has not resulted in any serious genetic disturbance of wild introduced S. japonica populations. An understanding of the genetic diversity and genetic structure of domesticated S. japonica will be necessary for further genetic improvement and effective use of germplasm.
DOI10.1038/srep42158
Indexed BySCI
Language英语
WOS IDWOS:000393556200001
Citation statistics
Document Type期刊论文
Version出版稿
Identifierhttp://ir.qdio.ac.cn/handle/337002/136312
Collection实验海洋生物学重点实验室
Affiliation1.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China
2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266071, Peoples R China
3.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
4.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst, Qingdao 266071, Peoples R China
5.Hokkaido Univ, Field Sci Ctr Northern Biosphere, Sapporo, Hokkaido 0600809, Japan
6.Pacific Res Fisheries Ctr, TINRO Ctr, Vladivostok 690600, Russia
First Author AffilicationKey Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences
Recommended Citation
GB/T 7714
Zhang, Jie,Wang, Xiuliang,Yao, Jianting,et al. Effect of domestication on the genetic diversity and structure of Saccharina japonica populations in China[J]. SCIENTIFIC REPORTS,2017,7.
APA Zhang, Jie.,Wang, Xiuliang.,Yao, Jianting.,Li, Qiuying.,Liu, Fuli.,...&Duan, Delin.(2017).Effect of domestication on the genetic diversity and structure of Saccharina japonica populations in China.SCIENTIFIC REPORTS,7.
MLA Zhang, Jie,et al."Effect of domestication on the genetic diversity and structure of Saccharina japonica populations in China".SCIENTIFIC REPORTS 7(2017).
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