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Mitogenomes provide insights into the phylogeny and evolution of brittle stars (Echinodermata, Ophiuroidea) 期刊论文
ZOOLOGICA SCRIPTA, 2022, 页码: 14
作者:  Sun, Shao'e;  Xiao, Ning;  Sha, Zhongli
Adobe PDF(9065Kb)  |  收藏  |  浏览/下载：169/0  |  提交时间：2023/01/04
deep-sea  gene arrangement  mitogenome  Ophiuroidea  phylogenetic analysis  
Full-Length Transcriptome Comparison Provides Novel Insights into the Molecular Basis of Adaptation to Different Ecological Niches of the Deep-Sea Hydrothermal Vent in Alvinocaridid Shrimps 期刊论文
DIVERSITY-BASEL, 2022, 卷号: 14, 期号: 5, 页码: 18
作者:  Wang, Aiyang;  Sha, Zhongli;  Hui, Min
Adobe PDF(1897Kb)  |  收藏  |  浏览/下载：137/0  |  提交时间：2022/07/18
Alvinocarididae  adaptive evolution  deep-sea chemosynthetic ecosystem  ecological niches  full-length transcriptome  
Mitogenomics provides new insights into the phylogenetic relationships and evolutionary history of deep-sea sea stars (Asteroidea) 期刊论文
SCIENTIFIC REPORTS, 2022, 卷号: 12, 期号: 1, 页码: 14
作者:  Sun, Shao'e;  Xiao, Ning;  Sha, Zhongli
Adobe PDF(4119Kb)  |  收藏  |  浏览/下载：148/0  |  提交时间：2022/07/15
The first two complete mitogenomes of the order Apodida from deep-sea chemoautotrophic environments: New insights into the gene rearrangement, origin and evolution of the deep-sea sea cucumbers 期刊论文
COMPARATIVE BIOCHEMISTRY AND PHYSIOLOGY D-GENOMICS & PROTEOMICS, 2021, 卷号: 39, 页码: 11
作者:  Sun, Shao'e;  Sha, Zhongli;  Xiao, Ning
Adobe PDF(9196Kb)  |  收藏  |  浏览/下载：162/0  |  提交时间：2021/11/30
Holothuroidea  Mitochondrial genome  Gene order  Phylogenetic analysis  Positive selection  
Chromosome-level genome assembly of Paralithodes platypus provides insights into evolution and adaptation of king crabs 期刊论文
MOLECULAR ECOLOGY RESOURCES, 2020, 页码: 15
作者:  Tang, Boping;  Wang, Zhongkai;  Liu, Qiuning;  Wang, Zhengfei;  Ren, Yandong;  Guo, Huayun;  Qi, Tingting;  Li, Yuetian;  Zhang, Huabin;  Jiang, Senhao;  Ge, Baoming;  Xuan, Fujun;  Sun, Yue;  She, Shusheng;  Yam Chan, Tin;  Sha, Zhongli;  Jiang, Hui;  Li, Haorong;  Jiang, Wei;  Qin, Yanli;  Wang, Kun;  Qiu, Qiang;  Wang, Wen;  Li, Xinzheng;  Ng, Ngan Kee;  Zhang, Daizhen;  Li, Yongxin
Adobe PDF(1963Kb)  |  收藏  |  浏览/下载：276/0  |  提交时间：2021/04/12
adaptation  blue king crab  evolution  genome  
Eyes of differing colors in Alvinocaris longirostris from deep-sea chemosynthetic ecosystems: genetic and molecular evidence of its formation mechanism 期刊论文
JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2020, 页码: 15
作者:  Xin, Qian;  Hui, Min;  Li, Chaolun;  Sha, Zhongli
Adobe PDF(1106Kb)  |  收藏  |  浏览/下载：277/0  |  提交时间：2020/09/24
alvinocaridid shrimps  cold seep and hydrothermal vent  differentially expressed genes  eye color  single nucleotide polymorphism (SNP) mutation  transcriptome  
Complete mitochondrial genomes of two deep-sea pandalid shrimps, Heterocarpus ensifer and Bitias brevis: insights into the phylogenetic position of Pandalidae (Decapoda: Caridea) 期刊论文
JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2020, 卷号: 38, 期号: 3, 页码: 816-825
作者:  Shao'e, Sun;  Cheng Jiao;  Sun Song;  Sha Zhongli
Adobe PDF(743Kb)  |  收藏  |  浏览/下载：172/0  |  提交时间：2020/09/24
Pandalidae  deep sea  mitochondrial genome  gene order  phylogenetic relationships  
Genomic evidence of population genetic differentiation in deep-sea squat lobster Shinkaia crosnieri (crustacea: Decapoda: Anomura) from Northwestern Pacific hydrothermal vent and cold seep 期刊论文
DEEP-SEA RESEARCH PART I-OCEANOGRAPHIC RESEARCH PAPERS, 2020, 卷号: 156, 页码: 12
作者:  Cheng, Jiao;  Hui, Min;  Li, Yulong;  Sha, Zhongli
Adobe PDF(1348Kb)  |  收藏  |  浏览/下载：284/0  |  提交时间：2020/09/22
Chemosynthetic fauna  Population connectivity  Local adaptation  Single nucleotide polymorphism  Cytochrome c oxidase subunit I  
High-Quality Genome Assembly of Eriocheir japonica sinensis Reveals Its Unique Genome Evolution 期刊论文
FRONTIERS IN GENETICS, 2020, 卷号: 10, 页码: 9
作者:  Tang, Boping;  Wang, Zhongkai;  Liu, Qiuning;  Zhang, Huabin;  Jiang, Senhao;  Li, Xinzheng;  Wang, Zhengfei;  Sun, Yue;  Sha, Zhongli;  Jiang, Hui;  Wu, Xugan;  Ren, Yandong;  Li, Haorong;  Xuan, Fujun;  Ge, Baoming;  Jiang, Wei;  She, Shusheng;  Sun, Hongying;  Qiu, Qiang;  Wang, Wen;  Wang, Qun;  Qiu, Gaofeng;  Zhang, Daizhen;  Li, Yongxin
Adobe PDF(804Kb)  |  收藏  |  浏览/下载：239/0  |  提交时间：2020/09/21
Eriocheir japonica sinensis  evolution  nanopore  crab  genome assembly and annotation  
Transcriptomic analysis reveals insights into deep-sea adaptations of the dominant species, Shinkaia crosnieri (Crustacea: Decapoda: Anomura), inhabiting both hydrothermal vents and cold seeps 期刊论文
BMC GENOMICS, 2019, 卷号: 20, 页码: 16
作者:  Cheng, Jiao;  Hui, Min;  Sha, Zhongli
Adobe PDF(3691Kb)  |  收藏  |  浏览/下载：315/0  |  提交时间：2019/08/28
Galatheidae  Deep-sea adaptation  Comparative transcriptome  Positive selection  Differential expression