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itol.toolkit accelerates working with iTOL (Interactive Tree of Life) by an automated generation of annotation files 期刊论文
BIOINFORMATICS, 2023, 卷号: 39, 期号: 6, 页码: 4
Authors:  Zhou, Tong;  Xu, Kuidong;  Zhao, Feng;  Liu, Weiyue;  Li, Longzhao;  Hua, Zhongyi;  Zhou, Xin
Favorite  |  View/Download:169/0  |  Submit date:2023/12/13
Refining the "Melting Pot" Genus Holosticha s. l. (Protozoa, Ciliophora, Hypotrichia) Based on Multigene Datasets with Establishment of a New Species Caudikeronopsis monilata sp. nov. 期刊论文
JOURNAL OF ZOOLOGICAL SYSTEMATICS AND EVOLUTIONARY RESEARCH, 2023, 卷号: 2023, 页码: 13
Authors:  Chen, Xumiao;  Li, Ju;  Xu, Kuidong
Favorite  |  View/Download:105/0  |  Submit date:2023/12/13
Insights into the phylogeny of three systematically controversial subfamilies of urostylid ciliates based on rDNA 期刊论文
ZOOLOGICA SCRIPTA, 2021, 页码: 13
Authors:  Chen, Xumiao;  Li, Ju;  Xu, Kuidong
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Detection of two pathogenic marine ciliates Ancistrum haliotis and A. crassum (Ciliophora: Scuticociliatia) by fluorescence in situ hybridization 期刊论文
ACTA OCEANOLOGICA SINICA, 2020, 页码: 5
Authors:  Zhan, Zifeng;  Xu, Kuidong
Adobe PDF(1551Kb)  |  Favorite  |  View/Download:226/0  |  Submit date:2021/04/12
oligonucleotide probes  molecular methods  scuticociliates  SSU rRNA  abalone  mollusc  
Are marine benthic microeukaryotes different from macrobenthos in terms of regional geographical distribution? New insights revealed by RNA metabarcoding 期刊论文
CONTINENTAL SHELF RESEARCH, 2020, 卷号: 209, 页码: 14
Authors:  Huang, Pingping;  Zhao, Feng;  Xu, Kuidong;  Zhou, Tong
Adobe PDF(9561Kb)  |  Favorite  |  View/Download:237/0  |  Submit date:2021/04/12
Microbial eukaryotes  Protist  Biogeography  Marine sediments  Environmental selection  Neutral process  
西太平洋沉积物病毒时空分布及分子多样性研究 学位论文
理学博士, 中国科学院海洋研究所: 中国科学院大学, 2020
Authors:  维妙
Adobe PDF(3542Kb)  |  Favorite  |  View/Download:375/0  |  Submit date:2020/06/09
海洋沉积物病毒,荧光计数法,vpr,病毒生产力,病毒phoh基因多样性  
Complementary DNA sequencing (cDNA): an effective approach for assessing the diversity and distribution of marine benthic ciliates along hydrographic gradients 期刊论文
JOURNAL OF OCEANOLOGY AND LIMNOLOGY, 2020, 页码: 15
Authors:  Huang Pingping;  Zhao Feng;  Xu Kuidong
Adobe PDF(1385Kb)  |  Favorite  |  View/Download:198/0  |  Submit date:2020/09/23
benthic ciliates  cDNA high-throughput sequencing  c  ommunity comparison  DNA high-throughput sequencing  morphology  
Ciliate Environmental Diversity Can Be Underestimated by the V4 Region of SSU rDNA: Insights from Species Delimitation and Multilocus Phylogeny of Pseudokeronopsis (Protist, Ciliophora) 期刊论文
MICROORGANISMS, 2019, 卷号: 7, 期号: 11, 页码: 25
Authors:  Zhan, Zifeng;  Li, Ju;  Xu, Kuidong
Adobe PDF(5488Kb)  |  Favorite  |  View/Download:426/0  |  Submit date:2020/03/20
metabarcode  DNA barcoding  cryptic species  secondary structure  ITS1-5.8S-ITS2  mitochondrial COI  rDNA  
Multigene-based phylogeny analyses of the controversial family Condylostomatidae (Ciliophora, Heterotrichea) 期刊论文
ZOOLOGICA SCRIPTA, 2019, 页码: 15
Authors:  Chen, Xumiao;  Li, Ju;  Xu, Kuidong
Adobe PDF(3787Kb)  |  Favorite  |  View/Download:360/0  |  Submit date:2020/01/03
Ciliophora  Condylostomatidae  multigene-phylogeny  rDNA  secondary structure