Mitochondrial phylogenomics reveals a close relationship between Petalonia fascia (Scytosiphonaceae, Phaeophyceae) and Ectocarpus siliculosus

doi:10.1007/s10811-014-0386-3

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	Mitochondrial phylogenomics reveals a close relationship between Petalonia fascia (Scytosiphonaceae, Phaeophyceae) and Ectocarpus siliculosus
	Liu, Feng; Pang, Shaojun
	2015-04-01
发表期刊	JOURNAL OF APPLIED PHYCOLOGY
卷号	27 期号:2 页码:1021-1028
文章类型	Article
摘要	The complete mitochondrial (mt) genome sequence of the brown alga, Petalonia fascia (O.F. Muller) Kuntze was determined and analyzed in this study. The 38,053-bp mt genome contains 68 genes, including 3 ribosomal RNA genes, 25 transfer RNA genes, 35 protein-coding genes, and 5 unidentified open reading frames (ORFs). The noncoding DNA represents 6.50 % of the total genome. The average size of intergenic spacers is 44.2 nucleotides with a range of 0 to 389 nucleotides. The nad11 gene in P. fascia, unlike other coding genes with a methionine (ATG) start codon, commences with a typical TTG codon. The P. fascia mt genome exhibits novel genome organization and gene arrangement, which are similar to those of Ectocarpus siliculosus. Phylogenetic analyses based on 35 protein-coding genes reveal that P. fascia has a close evolutionary relationship with E. siliculosus compared with other brown algae analyzed. The molecular data presented provide a useful tool for classification, evolutionary as well as population genetic studies in Scytosiphonaceae.
关键词	Petalonia Fascia Mitochondrial Genome Brown Algae Phaeophyceae Scytosiphonaceae
DOI	10.1007/s10811-014-0386-3
收录类别	SCI
语种	英语
WOS记录号	WOS:000352446200039
引用统计	被引频次：9[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/25463
专题	实验海洋生物学重点实验室
作者单位	Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China
第一作者单位	实验海洋生物学重点实验室
推荐引用方式 GB/T 7714	Liu, Feng,Pang, Shaojun. Mitochondrial phylogenomics reveals a close relationship between Petalonia fascia (Scytosiphonaceae, Phaeophyceae) and Ectocarpus siliculosus[J]. JOURNAL OF APPLIED PHYCOLOGY,2015,27(2):1021-1028.
APA	Liu, Feng,&Pang, Shaojun.(2015).Mitochondrial phylogenomics reveals a close relationship between Petalonia fascia (Scytosiphonaceae, Phaeophyceae) and Ectocarpus siliculosus.JOURNAL OF APPLIED PHYCOLOGY,27(2),1021-1028.
MLA	Liu, Feng,et al."Mitochondrial phylogenomics reveals a close relationship between Petalonia fascia (Scytosiphonaceae, Phaeophyceae) and Ectocarpus siliculosus".JOURNAL OF APPLIED PHYCOLOGY 27.2(2015):1021-1028.

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文件名称/大小	文献类型	版本类型	开放类型	使用许可
Mitochondrial phylog（603KB）	期刊论文	出版稿	限制开放	ODC PDDL	浏览