Integrated mRNA and miRNA transcriptomic analysis reveals the response of Rapana venosa to the metamorphic inducer (juvenile oysters)

doi:10.1016/j.csbj.2022.12.047

	Integrated mRNA and miRNA transcriptomic analysis reveals the response of Rapana venosa to the metamorphic inducer (juvenile oysters)
	Yang, Mei-Jie 1,2,3,4,6; Song, Hao 1,2,3,4,6; Shi, Pu1,2,3,4,5,6 ; Liang, Jian 7; Hu, Zhi 1,2,3,4,5,6; Zhou, Cong1,2,3,4,5,6 ; Hu, Peng-Peng1,2,3,4,5,6 ; Yu, Zheng-Lin3,8 ; Zhang, Tao1,2,3,4,6,9
	2023
发表期刊	COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL
ISSN	2001-0370
卷号	21 页码:702-715
通讯作者	Zhang, Tao(tzhang@qdio.ac.cn)
摘要	Metamorphosis, as a critical developmental event, controls the population dynamics of most marine in-vertebrates, especially some carnivorous gastropods that feed on bivalves, whose population dynamics not only affect the maintenance of the ecological balance but also impact the protection of bivalve resources; therefore, the metamorphosis of carnivorous gastropods deserve attention. Here, we investigated the mechanism underlying the response of the carnivorous gastropod Rapana venosa to its metamorphic in-ducer juvenile oysters through integrated analysis of miRNA and mRNA profiles. According to the results, we speculated that the AMPK signaling pathway may be the critical regulator in the response to juvenile oy-sters in R. venosa competent larvae. The NF-kB and JAK-STAT signaling pathways that regulated apoptosis were also activated by the metamorphic inducer, which may result in the degeneration of the velum. Additionally, the significant changes in the expression of the SARP-19 precursor gene and protein cibby homolog 1-like gene may indicate that these signaling pathways also regulate growth and development during metamorphosis. This study provides further evidence that juvenile oysters can induce metamor-phosis of R. venosa at the transcriptional level, which expands our understanding of the metamorphosis mechanism in carnivorous gastropods.(c) 2022 Published by Elsevier B.V. on behalf of Research Network of Computational and Structural Biotechnology. This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/ licenses/by-nc-nd/4.0/).
关键词	Rapana venosa Metamorphic inducer mRNA miRNA
DOI	10.1016/j.csbj.2022.12.047
收录类别	SCI
语种	英语
资助项目	National Natural Science Foundation of China[42206086] ; National Natural Science Foundation of China[31972814] ; National Natural Science Foundation of China[32002409] ; National Natural Science Foundation of China[32002374] ; China Postdoctoral Science Foundation[2021M703248] ; China Agriculture Research System of MOF and MARA ; Young Elite Scientists Sponsorship Program by CAST[2021QNRC001] ; Double Hundred' Blue Industry Leader Team of Yantai ; Creative Team Project of the Laboratory for Marine Ecology and Environmental Science, Qingdao National for Marine Science and Technology[LMEESCTSP-2018]
WOS研究方向	Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology
WOS类目	Biochemistry & Molecular Biology ; Biotechnology & Applied Microbiology
WOS记录号	WOS:000923567800001
出版者	ELSEVIER
WOS关键词	CELL-DEATH ; AUTOPHAGY ; APOPTOSIS ; SETTLEMENT ; CASPASE ; INDUCTION ; INTERPLAY ; CLONING ; LARVAE ; GENES
引用统计	被引频次：3[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/183459
专题	海洋生态与环境科学重点实验室
通讯作者	Zhang, Tao
作者单位	1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Sci & Technol, Qingdao, Peoples R China 3.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Peoples R China 4.Chinese Acad Sci, Inst Oceanol, CAS Engn Lab Marine Ranching, Qingdao, Peoples R China 5.Univ Chinese Acad Sci, Beijing 100049, Peoples R China 6.Shandong Prov Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China 7.Tianjin Agr Univ, Fisheries Coll, Tianjin Key Lab Aqua Ecol & Aquaculture, Tianjin 300384, Peoples R China 8.Chinese Acad Sci, Yantai Inst Coastal Zone Res, Res & Dev Ctr Efficient Utilizat Coastal Bioresour, Yantai 264003, Peoples R China 9.7 Nanhai Rd, Qingdao 266071, Shandong, Peoples R China
第一作者单位	中国科学院海洋研究所
通讯作者单位	中国科学院海洋研究所
推荐引用方式 GB/T 7714	Yang, Mei-Jie,Song, Hao,Shi, Pu,et al. Integrated mRNA and miRNA transcriptomic analysis reveals the response of Rapana venosa to the metamorphic inducer (juvenile oysters)[J]. COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL,2023,21:702-715.
APA	Yang, Mei-Jie.,Song, Hao.,Shi, Pu.,Liang, Jian.,Hu, Zhi.,...&Zhang, Tao.(2023).Integrated mRNA and miRNA transcriptomic analysis reveals the response of Rapana venosa to the metamorphic inducer (juvenile oysters).COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL,21,702-715.
MLA	Yang, Mei-Jie,et al."Integrated mRNA and miRNA transcriptomic analysis reveals the response of Rapana venosa to the metamorphic inducer (juvenile oysters)".COMPUTATIONAL AND STRUCTURAL BIOTECHNOLOGY JOURNAL 21(2023):702-715.