Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea

doi:10.1080/23802359.2021.1911715

	Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea
	Liu, Kuiyan 1,2,3,4; Liu, Shuya 1,2,4; Chen, Yang1,2,3,4 ; Liu, Feng 1,2,4; Chen, Nansheng 1,2,4,5
	2021-04-03
发表期刊	MITOCHONDRIAL DNA PART B-RESOURCES
卷号	6 期号:4 页码:1421-1423
通讯作者	Chen, Nansheng(chenn@qdio.ac.cn)
摘要	Thalassiosira nordenskioeldii is a common harmful algal bloom (HAB) species with worldwide distribution. Although barcode sequences of this ecologically important species have been published, no genome data have been published for T. nordenskioeldii. In this study, we constructed the complete mitochondrial genome (mtDNA) of a T. nordenskioeldii strain isolated from the East China Sea. The T. nordenskioeldii mtDNA is circular and has a length of 47,038 bp and a GC content of 30.84%. The mtDNA encodes 69 genes, including 40 protein-coding (PCGs), 27 tRNA and two rRNA genes. Phylogenetic analysis using concatenated amino acid sequences of 31 shared PCGs from 37 diatom mtDNAs revealed that the mtDNA of T. nordenskioeldii was fully resolved in a clade with that of Thalassiosira profunda. The mtDNA of T. nordenskioeldii showed high collinearity with those of T. profunda and Skeletonema marinoi with only minor rearrangements. The completion of Thalassiosira mtDNAs will facilitate evolutionary studies on species of the order Thalassiosirales and the class Mediophyceae.
关键词	Diatoms HAB species mitochondrial genome Thalassiosira nordenskioeldii
DOI	10.1080/23802359.2021.1911715
收录类别	SCI
语种	英语
资助项目	Strategic Priority Research Program of Chinese Academy of Sciences[XDB42000000] ; Chinese Academy of Sciences ; Pioneer Hundred Talents Program ; Taishan Scholar Project Special Fund ; Qingdao Innovation and Creation Plan (Talent Development Program-5th Annual Pioneer and Innovator Leadership Award)[193-2-16-zhc] ; Key Research Program of Frontier Sciences, Chinese Academy of Sciences[QYZDB-SSW-DQC023] ; Major Scientific and Technological Innovation Project of Shandong Province[2019JZZY020706] ; National Natural Science Foundation of China (NSFC) Open Research Cruise - Shiptime Sharing Project of NSFC[NORC2019-01]
WOS研究方向	Genetics & Heredity
WOS类目	Genetics & Heredity
WOS记录号	WOS:000640399800001
出版者	TAYLOR & FRANCIS LTD
引用统计	被引频次：2[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/170553
专题	海洋生态与环境科学重点实验室
通讯作者	Chen, Nansheng
作者单位	1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 3.Univ Chinese Acad Sci, Sch Earth & Planetary, Beijing, Peoples R China 4.Chinese Acad Sci, Ctr Ocean Megasci, Qingdao, Peoples R China 5.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC, Canada
第一作者单位	中国科学院海洋研究所; 中国科学院海洋大科学研究中心
通讯作者单位	中国科学院海洋研究所; 中国科学院海洋大科学研究中心
推荐引用方式 GB/T 7714	Liu, Kuiyan,Liu, Shuya,Chen, Yang,et al. Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea[J]. MITOCHONDRIAL DNA PART B-RESOURCES,2021,6(4):1421-1423.
APA	Liu, Kuiyan,Liu, Shuya,Chen, Yang,Liu, Feng,&Chen, Nansheng.(2021).Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea.MITOCHONDRIAL DNA PART B-RESOURCES,6(4),1421-1423.
MLA	Liu, Kuiyan,et al."Complete mitochondrial genome of the harmful algal bloom species Thalassiosira nordenskioeldii (Mediophyceae, Bacillariophyta) from the east China sea".MITOCHONDRIAL DNA PART B-RESOURCES 6.4(2021):1421-1423.

条目包含的文件
文件名称/大小	文献类型	版本类型	开放类型	使用许可
Chinasea.pdf（1159KB）	期刊论文	出版稿	限制开放	CC BY-NC-SA	浏览