Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)

doi:10.1093/gigascience/giaa080

	Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)
	Fan, Guangyi 1,9; Song, Yue 1; Yang, Liandong 2; Huang, Xiaoyun 1; Zhang, Suyu 1; Zhang, Mengqi 1; Yang, Xianwei 1; Chang, Yue 1; Zhang, He 1,9; Li, Yongxin 3; Liu, Shanshan 1; Yu, Lili 1; Chu, Jeffery 4; Seim, Inge 5,10; Feng, Chenguang 3; Near, Thomas J.6; Wing, Rod A.7; Wang, Wen 3; Wang, Kun 3; Wang, Jing 8,11,13; Xu, Xun 9; Yang, Huanming 1,9; Liu, Xin 1,9,12; Chen, Nansheng 8,11,13,14; He, Shunping 2
	2020-08-01
发表期刊	GIGASCIENCE
ISSN	2047-217X
卷号	9 期号:8 页码:7
通讯作者	He, Shunping(clad@ihb.ac.cn)
摘要	Background: With more than 30,000 species, fish-including bony, jawless, and cartilaginous fish-are the largest vertebrate group, and include some of the earliest vertebrates. Despite their critical roles in many ecosystems and human society, fish genomics lags behind work on birds and mammals. This severely limits our understanding of evolution and hinders progress on the conservation and sustainable utilization of fish. Results: Here, we announce the Fish10K project, a portion of the Earth BioGenome Project aiming to sequence 10,000 representative fish genomes in a systematic fashion within 10 years, and we officially welcome collaborators to join this effort. As a step towards this goal, we herein describe a feasible workflow for the procurement and storage of biospecimens, as well as sequencing and assembly strategies. Conclusions: To illustrate, we present the genomes of 10 fish species from a cohort of 93 species chosen for technology development.
关键词	Fish10K fish genome sequencing phylogenetics evolution stLFR
DOI	10.1093/gigascience/giaa080
收录类别	SCI
语种	英语
资助项目	special funding of Blue granary scientific and technological innovation of China[2018YFD0900301-05]
WOS研究方向	Life Sciences & Biomedicine - Other Topics ; Science & Technology - Other Topics
WOS类目	Biology ; Multidisciplinary Sciences
WOS记录号	WOS:000569172100003
出版者	OXFORD UNIV PRESS
引用统计	被引频次：34[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/168882
专题	海洋生态与环境科学重点实验室
通讯作者	He, Shunping
作者单位	1.BGI Qingdao, 2 Hengyunshan Rd, Qingdao 266426, Peoples R China 2.Chinese Acad Sci, Inst Hydrobiol, Key Lab Aquat Biodivers & Conservat, 7 Donghu South Rd, Wuhan, Hubei, Peoples R China 3.Northwestern Polytech Univ, Ctr Ecol & Environm Sci, 1 Dongxiang Rd, Xian 710129, Shaanxi, Peoples R China 4.Frasergen, Donghu High Tech Dev Zone, Wuhan, Hubei, Peoples R China 5.Nanjing Normal Univ, Coll Life Sci, Integrat Biol Lab, 1 Wenyuan Rd, Nanjing 210023, Peoples R China 6.Yale Univ, Dept Ecol & Evolutionary Biol, New Haven, CT 06511 USA 7.King Abdullah Univ Sci & Technol, Biol & Environm Sci & Engn Div, Thuwal 239556900, Saudi Arabia 8.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, 7 Nanhai Rd, Qingdao 266071, Shandong, Peoples R China 9.BGI Shenzhen, Bldg 11, Shenzhen 518083, Peoples R China 10.Queensland Univ Technol, Comparat & Endocrine Biol Lab, Translat Res Inst, Inst Hlth & Biomed Innovat,Sch Biomed Sci, Brisbane, Qld 4102, Australia 11.Pilot Natl Lab Marine Sci & Technol, Marine Ecol & Environm Sci Lab, 1 Wenhai Rd, Qingdao 266237, Shandong, Peoples R China 12.BGI Shenzhen, State Key Lab Agr Genom, Bldg 11, Shenzhen 518083, Peoples R China 13.Chinese Acad Sci, Ctr Ocean Mega Sci, 7 Nanhai Rd, Qingdao 266400, Peoples R China 14.Simon Fraser Univ, Dept Mol Biol & Biochem, Burnaby, BC V5A 1S6, Canada
推荐引用方式 GB/T 7714	Fan, Guangyi,Song, Yue,Yang, Liandong,et al. Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)[J]. GIGASCIENCE,2020,9(8):7.
APA	Fan, Guangyi.,Song, Yue.,Yang, Liandong.,Huang, Xiaoyun.,Zhang, Suyu.,...&He, Shunping.(2020).Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K).GIGASCIENCE,9(8),7.
MLA	Fan, Guangyi,et al."Initial data release and announcement of the 10,000 Fish Genomes Project (Fish10K)".GIGASCIENCE 9.8(2020):7.

条目包含的文件
文件名称/大小	文献类型	版本类型	开放类型	使用许可
giaa080.pdf（3287KB）	期刊论文	出版稿	限制开放	CC BY-NC-SA	浏览