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The complete mitochondrial genomes of two vent squat lobsters, Munidopsis lauensis and M. verrilli: Novel gene arrangements and phylogenetic implications
Sun, Shao'e1,2; Sha, Zhongli1,2,3,4; Wang, Yanrong1,2
2019-09-30
发表期刊ECOLOGY AND EVOLUTION
ISSN2045-7758
页码18
通讯作者Sha, Zhongli(shazl@qdio.ac.cn)
摘要Hydrothermal vents are considered as one of the most extremely harsh environments on the Earth. In this study, the complete mitogenomes of hydrothermal vent squat lobsters, Munidopsis lauensis and M. verrilli, were determined through Illumina sequencing and compared with other available mitogenomes of anomurans. The mitogenomes of M. lauensis (17,483 bp) and M. verrilli (17,636 bp) are the largest among all Anomura mitogenomes, while the A+T contents of M. lauensis (62.40%) and M. verrilli (63.99%) are the lowest. The mitogenomes of M. lauensis and M. verrilli display novel gene arrangements, which might be the result of three tandem duplication-random loss (tdrl) events from the ancestral pancrustacean pattern. The mitochondrial gene orders of M. lauensis and M. verrilli shared the most similarities with S. crosnieri. The phylogenetic analyses based on both gene order data and nucleotide sequences (PCGs and rRNAs) revealed that the two species were closely related to Shinkaia crosnieri. Positive selection analysis revealed that eighteen residues in seven genes (atp8, Cytb, nad3, nad4, nad4l, nad5, and nad6) of the hydrothermal vent anomurans were positively selected sites.
关键词adaptive evolution Anomura gene rearrangements hydrothermal vent mitochondrial genome
DOI10.1002/ece3.5542
收录类别SCI
语种英语
资助项目Key Research Program of Frontier Sciences the Chinese Academy of Sciences[QYZDB-SSWDQC036] ; China Postdoctoral Science Foundation[2018M630803] ; RV KEXUE[KEXUE2017G10] ; Key Research Program of Frontier Sciences the Chinese Academy of Sciences[QYZDB-SSWDQC036] ; China Postdoctoral Science Foundation[2018M630803] ; RV KEXUE[KEXUE2017G10]
WOS研究方向Environmental Sciences & Ecology ; Evolutionary Biology
WOS类目Ecology ; Evolutionary Biology
WOS记录号WOS:000488593200001
出版者WILEY
引用统计
被引频次:13[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
条目标识符http://ir.qdio.ac.cn/handle/337002/163331
专题深海极端环境与生命过程研究中心
通讯作者Sha, Zhongli
作者单位1.Chinese Acad Sci, Deep Sea Res Ctr, Inst Oceanol, Qingdao 266071, Shandong, Peoples R China
2.Chinese Acad Sci, Ctr Ocean Mega Sci, Qingdao, Shandong, Peoples R China
3.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Shandong, Peoples R China
4.Univ Chinese Acad Sci, Beijing, Peoples R China
第一作者单位中国科学院海洋研究所
通讯作者单位中国科学院海洋研究所
推荐引用方式
GB/T 7714
Sun, Shao'e,Sha, Zhongli,Wang, Yanrong. The complete mitochondrial genomes of two vent squat lobsters, Munidopsis lauensis and M. verrilli: Novel gene arrangements and phylogenetic implications[J]. ECOLOGY AND EVOLUTION,2019:18.
APA Sun, Shao'e,Sha, Zhongli,&Wang, Yanrong.(2019).The complete mitochondrial genomes of two vent squat lobsters, Munidopsis lauensis and M. verrilli: Novel gene arrangements and phylogenetic implications.ECOLOGY AND EVOLUTION,18.
MLA Sun, Shao'e,et al."The complete mitochondrial genomes of two vent squat lobsters, Munidopsis lauensis and M. verrilli: Novel gene arrangements and phylogenetic implications".ECOLOGY AND EVOLUTION (2019):18.
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文件名: Sun-2019-The-complete-mitochondrial-genomes-.pdf
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文件名: The complete mitochondrial genomes of two vent squat lobsters, Munidopsis lauensis and M. verrilli_ Novel gene arrangements and phylogenetic implications.pdf
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