Institutional Repository of Key Laboratory of Experimental Marine Biology, Institute of Oceanology, Chinese Academy of Sciences
| Complete genome sequence of shrimp hemocyte iridescent virus (SHIV) isolated from white leg shrimp, Litopenaeus vannamei | |
Qiu, Liang1,2; Chen, Meng-Meng1,2; Wang, Ruo-Yu1,3; Wan, Xiao-Yuan1; Li, Chen1; Zhang, Qing-Li1,2; Dong, Xuan1; Yang, Bing1 ; Xiang, Jian-Hai4; Huang, Jie1,2,3
| |
| 2018-03-01 | |
| 发表期刊 | ARCHIVES OF VIROLOGY
 |
| ISSN | 0304-8608 |
| 卷号 | 163期号:3页码:781-785 |
| 通讯作者 | Huang, Jie(huangjie@ysfri.ac.cn) |
| 摘要 | Infection with shrimp hemocyte iridescent virus (SHIV), a new virus of the family Iridoviridae isolated in China, results in a high mortality rate in white leg shrimp (Litopenaeus vannamei). The complete genome sequence of SHIV was determined and analyzed in this study. The genomic DNA was 165,809 bp long with 34.6% G+C content and 170 open reading frames (ORFs). Dotplot analysis showed that the longest repetitive region was 320 bp in length, including 11 repetitions of an 18-bp sequence and 3.1 repetitions of a 39-bp sequence. Two phylogenetic trees were constructed based on 27 or 16 concatenated sequences of proteins encoded by genes that are conserved between SHIV homologous and other iridescent viruses. The results of this study, suggest that SHIV should be considered a member of the proposed new genus "Xiairidovirus". |
| DOI | 10.1007/s00705-017-3642-4 |
| 收录类别 | SCI |
| 语种 | 英语 |
| 资助项目 | China Agriculture Research System[CARS-47] ; China ASEAN Maritime Cooperation Fund Project ; Program of Introducing Internationally Advanced Agricultural Science and Technology[948: 2016-X56] ; Project of the Aoshan Science and Technology Innovation Program of Qingdao National Laboratory for Marine Science and Technology[2015ASKJ02] ; Construction Programme for Distinguished Taishan Scholars of Shandong Province of China ; China Agriculture Research System[CARS-47] ; China ASEAN Maritime Cooperation Fund Project ; Program of Introducing Internationally Advanced Agricultural Science and Technology[948: 2016-X56] ; Project of the Aoshan Science and Technology Innovation Program of Qingdao National Laboratory for Marine Science and Technology[2015ASKJ02] ; Construction Programme for Distinguished Taishan Scholars of Shandong Province of China |
| WOS研究方向 | Virology |
| WOS类目 | Virology |
| WOS记录号 | WOS:000425289200029 |
| 出版者 | SPRINGER WIEN |
| 引用统计 | |
| 文献类型 | 期刊论文 |
| 条目标识符 | http://ir.qdio.ac.cn/handle/337002/158092 |
| 专题 | 实验海洋生物学重点实验室 |
| 通讯作者 | Huang, Jie |
| 作者单位 | 1.Chinese Acad Fishery Sci, Yellow Sea Fisheries Res Inst,Qingdao Natl Lab Ma, Qingdao Key Lab Mariculture Epidemiol & Biosecur, Minist Agr,Funct Lab Marine Fisheries Sci & Food, Qingdao 266071, Peoples R China 2.Shanghai Ocean Univ, Shanghai 201306, Peoples R China 3.Dalian Ocean Univ, Dalian 116023, Peoples R China 4.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China |
| 推荐引用方式 GB/T 7714 | Qiu, Liang,Chen, Meng-Meng,Wang, Ruo-Yu,et al. Complete genome sequence of shrimp hemocyte iridescent virus (SHIV) isolated from white leg shrimp, Litopenaeus vannamei[J]. ARCHIVES OF VIROLOGY,2018,163(3):781-785. |
| APA | Qiu, Liang.,Chen, Meng-Meng.,Wang, Ruo-Yu.,Wan, Xiao-Yuan.,Li, Chen.,...&Huang, Jie.(2018).Complete genome sequence of shrimp hemocyte iridescent virus (SHIV) isolated from white leg shrimp, Litopenaeus vannamei.ARCHIVES OF VIROLOGY,163(3),781-785. |
| MLA | Qiu, Liang,et al."Complete genome sequence of shrimp hemocyte iridescent virus (SHIV) isolated from white leg shrimp, Litopenaeus vannamei".ARCHIVES OF VIROLOGY 163.3(2018):781-785. |
| 条目包含的文件 | ||||||
| 文件名称/大小 | 文献类型 | 版本类型 | 开放类型 | 使用许可 | ||
| Complete genome sequ（2506KB） | 期刊论文 | 出版稿 | 限制开放 | CC BY-NC-SA | 浏览 | |
除非特别说明，本系统中所有内容都受版权保护，并保留所有权利。
修改评论