Institutional Repository of Key Laboratory of Marine Ecology & Environmental Sciences, CAS
Transcriptomic Analyses of Scrippsiella trochoidea Reveals Processes Regulating Encystment and Dormancy in the Life Cycle of a Dinoflagellate, with a Particular Attention to the Role of Abscisic Acid | |
Deng, Yunyan1,2; Hu, Zhangxi1,2; Shang, Lixia1; Peng, Quancai3; Tang, Ying Zhong1,2 | |
2017-12-11 | |
发表期刊 | FRONTIERS IN MICROBIOLOGY |
ISSN | 1664-302X |
卷号 | 8页码:19 |
通讯作者 | Tang, Ying Zhong(yingzhong.tang@qdio.ac.cn) |
摘要 | Due to the vital importance of resting cysts in the biology and ecology of many dinoflagellates, a transcriptomic investigation on Scrippsiella trochoidea was conducted with the aim to reveal the molecular processes and relevant functional genes regulating encystment and dormancy in dinoflagellates. We identified via RNA-seq 3,874 (out of 166,575) differentially expressed genes (DEGs) between resting cysts and vegetative cells; a pause of photosynthesis (confirmed via direct measurement of photosynthetic efficiency); an active catabolism including beta-oxidation, glycolysis, glyoxylate pathway, and TCA in resting cysts (tested via measurements of respiration rate); 12 DEGs encoding meiotic recombination proteins and members of MEI2-like family potentially involved in sexual reproduction and encystment; elevated expressions in genes encoding enzymes responding to pathogens (chitin deacetylase) and ROS stress in cysts; and 134 unigenes specifically expressed in cysts. We paid particular attention to genes pertaining to phytohormone signaling and identified 4 key genes regulating abscisic acid (ABA) biosynthesis and catabolism, with further characterization based on their full-length cDNA obtained via RACE-PCR. The qPCR results demonstrated elevated biosynthesis and repressed catabolism of ABA during the courses of encystment and cyst dormancy, which was significantly enhanced by lower temperature (4 +/- 1 degrees C) and darkness. Direct measurements of ABA using UHPLC-MS/MS and ELISA in vegetative cells and cysts both fully supported qPCR results. These results collectively suggest a vital role of ABA in regulating encystment and maintenance of dormancy, akin to its function in seed dormancy of higher plants. Our results provided a critical advancement in understanding molecular processes in resting cysts of dinoflagellates. |
关键词 | resting cyst harmful algal blooms (HABs) dormancy UHPLC-MS/MS abscisicacid (ABA) dinoflagellate Scrippsiella trochoidea |
DOI | 10.3389/fmicb.2017.02450 |
收录类别 | SCI |
语种 | 英语 |
资助项目 | NSFC-Shandong Joint Fund for Marine Ecology and Environmental Sciences[U1606404] ; National Science Foundation of China[41476142] ; National Science Foundation of China[41606126] ; National Science Foundation of China[61533011] ; National Science Foundation of China[41506143] ; National Science Foundation of China[U1301235] ; Scientific and Technological Innovation Project ; Qingdao National Laboratory for Marine Science and Technology[2016ASKJ02] ; NSFC-Shandong Joint Fund for Marine Ecology and Environmental Sciences[U1606404] ; National Science Foundation of China[41476142] ; National Science Foundation of China[41606126] ; National Science Foundation of China[61533011] ; National Science Foundation of China[41506143] ; National Science Foundation of China[U1301235] ; Scientific and Technological Innovation Project ; Qingdao National Laboratory for Marine Science and Technology[2016ASKJ02] |
WOS研究方向 | Microbiology |
WOS类目 | Microbiology |
WOS记录号 | WOS:000417577500001 |
出版者 | FRONTIERS MEDIA SA |
引用统计 | |
文献类型 | 期刊论文 |
条目标识符 | http://ir.qdio.ac.cn/handle/337002/157781 |
专题 | 海洋生态与环境科学重点实验室 所级公共技术中心 |
通讯作者 | Tang, Ying Zhong |
作者单位 | 1.Chinese Acad Sci, Inst Oceanol, CAS Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China 3.Chinese Acad Sci, Inst Oceanol, Res Ctr Anal & Measurement, Qingdao, Peoples R China |
第一作者单位 | 中国科学院海洋研究所 |
通讯作者单位 | 中国科学院海洋研究所 |
推荐引用方式 GB/T 7714 | Deng, Yunyan,Hu, Zhangxi,Shang, Lixia,et al. Transcriptomic Analyses of Scrippsiella trochoidea Reveals Processes Regulating Encystment and Dormancy in the Life Cycle of a Dinoflagellate, with a Particular Attention to the Role of Abscisic Acid[J]. FRONTIERS IN MICROBIOLOGY,2017,8:19. |
APA | Deng, Yunyan,Hu, Zhangxi,Shang, Lixia,Peng, Quancai,&Tang, Ying Zhong.(2017).Transcriptomic Analyses of Scrippsiella trochoidea Reveals Processes Regulating Encystment and Dormancy in the Life Cycle of a Dinoflagellate, with a Particular Attention to the Role of Abscisic Acid.FRONTIERS IN MICROBIOLOGY,8,19. |
MLA | Deng, Yunyan,et al."Transcriptomic Analyses of Scrippsiella trochoidea Reveals Processes Regulating Encystment and Dormancy in the Life Cycle of a Dinoflagellate, with a Particular Attention to the Role of Abscisic Acid".FRONTIERS IN MICROBIOLOGY 8(2017):19. |
条目包含的文件 | 条目无相关文件。 |
除非特别说明,本系统中所有内容都受版权保护,并保留所有权利。
修改评论