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Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region
Gao, Tian-Xiang1; Yang, Tian-Yan1; Yanagimoto, Takashi2; Xiao, Yong-Shuang3,4,5
2019-01-02
Source PublicationMITOCHONDRIAL DNA PART A
ISSN2470-1394
Volume30Issue:1Pages:172-183
Corresponding AuthorXiao, Yong-Shuang(dahaishuang1982@163.com)
AbstractJapanese whiting (Sillago japonica) is a commercially important demersal fish distributed along the coasts of East Asia and becomes recently an aquaculture species. Despite its commercial importance, the levels and patterns of population genetic variation remain poorly understood. In this study, 346 specimens were collected from 14 localities along the coastal waters of China, Korea and Japan and their genetic variation was analyzed with mtDNA control region (D-loop) sequences. A total of 131 polymorphic sites were detected which determined 294 haplotypes. A pattern with high levels of haplotype diversity (h = 0.999 +/- 0.001) and nucleotide diversity (л = 0.030 +/- 0.015) was detected in the examined range. Analyses of analysis of molecular variance (AMOVA) and F-st showed that no significant genetic differentiation existed among China, Korea and Japan populations, excepting for the populations between Ise Bay (IBP) sample and the other ones. Minimum spanning tree (MST), neutrality tests, mismatch distribution and Bayesian skyline analyses indicated that the species along coastline of China, Korea and Japan have experienced population expansions originated in its most recent history at about 106-423 kya during the late Pleistocene glaciations and deglaciations periods.
KeywordSillago japonica control region genetic diversity genetic structure demographic history
DOI10.1080/24701394.2018.1467411
Indexed BySCI
Language英语
Funding ProjectNational Natural Science Foundation of China[31572227] ; National Natural Science Foundation of China[41776171] ; Scientific Startup Foundation of Zhejiang Ocean University[Q1505] ; Shandong Province Keypoint Research and Invention Program[2017GHY15102] ; Shandong Province Keypoint Research and Invention Program[2017GHY15106] ; Qingdao Source Innovation Program[17-1-1-57-jch] ; Marine Fishery Institute of Zhejiang Province ; Key Laboratory of Mariculture and Enhancement of Zhejiang Province[2016KF002] ; STS[41506170] ; STS[ZSSD-019]
WOS Research AreaGenetics & Heredity
WOS SubjectGenetics & Heredity
WOS IDWOS:000461357300020
PublisherTAYLOR & FRANCIS LTD
Citation statistics
Cited Times:2[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Identifierhttp://ir.qdio.ac.cn/handle/337002/155316
Collection实验海洋生物学重点实验室
Corresponding AuthorXiao, Yong-Shuang
Affiliation1.Zhejiang Ocean Univ, Natl Engn Res Ctr Marine Aquaculture, Zhoushan, Zhejiang, Peoples R China
2.Fisheries Res Agcy, Natl Res Inst Fisheries Sci, Yokohama, Kanagawa, Japan
3.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao, Peoples R China
4.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China
5.Chinese Acad Sci, Ctr Ocean Megasci, Qingdao, Peoples R China
Corresponding Author AffilicationInstitute of Oceanology, Chinese Academy of Sciences
Recommended Citation
GB/T 7714
Gao, Tian-Xiang,Yang, Tian-Yan,Yanagimoto, Takashi,et al. Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region[J]. MITOCHONDRIAL DNA PART A,2019,30(1):172-183.
APA Gao, Tian-Xiang,Yang, Tian-Yan,Yanagimoto, Takashi,&Xiao, Yong-Shuang.(2019).Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region.MITOCHONDRIAL DNA PART A,30(1),172-183.
MLA Gao, Tian-Xiang,et al."Levels and patterns of genetic variation in Japanese whiting (Sillago japonica) based on mitochondrial DNA control region".MITOCHONDRIAL DNA PART A 30.1(2019):172-183.
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