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Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through highthroughput sequencing
Li, Shaoxuan1,2; Shao, Zhanru3,4; Fu, Xiling1,2; Xiao, Wei1,2; Li, Ling1,2; Chen, Ming1,2; Sun, Mingyue1,2; Li, Dongmei1,2; Gao, Dongsheng1,2
2017-12-02
发表期刊BMC GENOMICS
卷号18
文章类型Article
摘要Background: MicroRNAs (miRNAs) are small non-coding RNAs that regulate gene expression of target mRNAs involved in plant growth, development, and abiotic stress. As one of the most important model plants, peach (Prunus persica) has high agricultural significance and nutritional values. It is well adapted to be cultivated in greenhouse in which some auxiliary conditions like temperature, humidity, and UVB etc. are needed to ensure the fruit quality. However, little is known about the genomic information of P. persica under UVB supplement. Transcriptome and expression profiling data for this species are therefore important resources to better understand the biological mechanism of seed development, formation and plant adaptation to environmental change. Using a high-throughput miRNA sequencing, followed by qRT-PCR tests and physiological properties determination, we identified the responsive-miRNAs under low-dose UVB treatment and described the expression pattern and putative function of related miRNAs and target genes in chlorophyll and carbohydrate metabolism.
关键词Prunus Persica Uvb Microrna High-throughput Sequencing Chlorophyll And Carbohydrates
DOI10.1186/s12864-017-4347-5
收录类别SCI
语种英语
WOS记录号WOS:000416966600004
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文献类型期刊论文
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条目标识符http://ir.qdio.ac.cn/handle/337002/154347
专题实验海洋生物学重点实验室
作者单位1.Shandong Agr Univ, Coll Hort Sci & Engn, Tai An 271018, Shandong, Peoples R China
2.Shandong Agr Univ, State Key Lab Crop Biol, Tai An 271018, Shandong, Peoples R China
3.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China
4.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266237, Peoples R China
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Li, Shaoxuan,Shao, Zhanru,Fu, Xiling,et al. Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through highthroughput sequencing[J]. BMC GENOMICS,2017,18.
APA Li, Shaoxuan.,Shao, Zhanru.,Fu, Xiling.,Xiao, Wei.,Li, Ling.,...&Gao, Dongsheng.(2017).Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through highthroughput sequencing.BMC GENOMICS,18.
MLA Li, Shaoxuan,et al."Identification and characterization of Prunus persica miRNAs in response to UVB radiation in greenhouse through highthroughput sequencing".BMC GENOMICS 18(2017).
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