Scallop genome provides insights into evolution of bilaterian karyotype and development

doi:10.1038/s41559-017-0120

IOCAS-IR > 实验海洋生物学重点实验室

	Scallop genome provides insights into evolution of bilaterian karyotype and development
	Wang, Shi 1,2; Zhang, Jinbo 3; Jiao, Wenqian 1; Li, Ji 3; Xun, Xiaogang 1; Sun, Yan 1; Guo, Ximing 4; Huan, Pin 5; Dong, Bo 1,2; Zhang, Lingling 1; Hu, Xiaoli 1,6; Sun, Xiaoqing3 ; Wang, Jing 1; Zhao, Chengtian 7; Wang, Yangfan 1; Wang, Dawei 3; Huang, Xiaoting 1; Wang, Ruijia 1; Lv, Jia 1; Li, Yuli 1; Zhang, Zhifeng 1; Liu, Baozhong5 ; Lu, Wei 1; Hui, Yuanyuan 3; Liang, Jun 8; Zhou, Zunchun 9; Hou, Rui 1; Li, Xue 1; Liu, Yunchao 3; Li, Hengde 1,10; Ning, Xianhui 1; Lin, Yu 3; Zhao, Liang 1; Xing, Qiang 1; Dou, Jinzhuang 1; Li, Yangping 1; Mao, Junxia 1; Guo, Haobing 1; Dou, Huaiqian 1; Li, Tianqi 1; Mu, Chuang 1; Jiang, Wenkai 3; Fu, Qiang 1; Fu, Xiaoteng 1; Miao, Yan 1; Liu, Jian 3; Yu, Qian 1; Li, Ruojiao 1; Liao, Huan 1; Li, Xuan 1; Kong, Yifan 1; Jiang, Zhi 3; Chourrout, Daniel 11; Li, Ruiqiang 3; Bao, Zhenmin 1,6
	2017-05-01
发表期刊	NATURE ECOLOGY & EVOLUTION
卷号	1 期号:5
文章类型	Article
摘要	Reconstructing the genomes of bilaterian ancestors is central to our understanding of animal evolution, where knowledge from ancient and/or slow-evolving bilaterian lineages is critical. Here we report a high-quality, chromosome-anchored reference genome for the scallop Patinopecten yessoensis, a bivalve mollusc that has a slow-evolving genome with many ancestral features. Chromosome-based macrosynteny analysis reveals a striking correspondence between the 19 scallop chromosomes and the 17 presumed ancestral bilaterian linkage groups at a level of conservation previously unseen, suggesting that the scallop may have a karyotype close to that of the bilaterian ancestor. Scallop Hox gene expression follows a new mode of subcluster temporal co-linearity that is possibly ancestral and may provide great potential in supporting diverse bilaterian body plans. Transcriptome analysis of scallop mantle eyes finds unexpected diversity in phototransduction cascades and a potentially ancient Pax2/5/8-dependent pathway for noncephalic eyes. The outstanding preservation of ancestral karyotype and developmental control makes the scallop genome a valuable resource for understanding early bilaterian evolution and biology.
DOI	10.1038/s41559-017-0120
收录类别	SCI
语种	英语
WOS记录号	WOS:000417173100010
引用统计	被引频次：280[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
版本	出版稿
条目标识符	http://ir.qdio.ac.cn/handle/337002/154314
专题	实验海洋生物学重点实验室
作者单位	1.Ocean Univ China, Minist Educ, Key Lab Marine Genet & Breeding, Qingdao 266003, Peoples R China 2.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao 266237, Peoples R China 3.Novogene Bioinformat Inst, Beijing 100083, Peoples R China 4.Rutgers State Univ, Dept Marine & Coastal Sci, Haskin Shellfish Res Lab, Port Norris, NJ 08349 USA 5.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao 266071, Peoples R China 6.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Fisheries Sci & Food Prod Proc, Qingdao 266237, Peoples R China 7.Ocean Univ China, Inst Evolut & Marine Biodivers, Qingdao 266003, Peoples R China 8.Dalian Zhangzidao Grp Co Ltd, Dalian 116001, Peoples R China 9.Liaoning Ocean & Fisheries Sci Res Inst, Liaoning Key Lab Marine Fishery Mol Biol, Dalian 116023, Peoples R China 10.Chinese Acad Fishery Sci, Minist Agr, Key Lab Aquat Genom, Beijing 100141, Peoples R China 11.Univ Bergen, Sars Int Ctr Marine Mol Biol, N-5008 Bergen, Norway
推荐引用方式 GB/T 7714	Wang, Shi,Zhang, Jinbo,Jiao, Wenqian,et al. Scallop genome provides insights into evolution of bilaterian karyotype and development[J]. NATURE ECOLOGY & EVOLUTION,2017,1(5).
APA	Wang, Shi.,Zhang, Jinbo.,Jiao, Wenqian.,Li, Ji.,Xun, Xiaogang.,...&Bao, Zhenmin.(2017).Scallop genome provides insights into evolution of bilaterian karyotype and development.NATURE ECOLOGY & EVOLUTION,1(5).
MLA	Wang, Shi,et al."Scallop genome provides insights into evolution of bilaterian karyotype and development".NATURE ECOLOGY & EVOLUTION 1.5(2017).

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文件名称/大小	文献类型	版本类型	开放类型	使用许可
Scallop genome provi（5744KB）	期刊论文	出版稿	限制开放	CC BY-NC-SA	浏览