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Diversity and characterization of bacteria associated with the deep-sea hydrothermal vent crab Austinograea sp comparing with those of two shallow-water crabs by 16S ribosomal DNA analysis
Zhang, Na1; Song, Chengwen1; Wang, Minxiao2,3; Liu, Yuan1; Hui, Min1; Cui, Zhaoxia1,4,5
2017-11-09
Source PublicationPLOS ONE
Volume12Issue:11
SubtypeArticle
AbstractFor deep-sea hydrothermal vent crabs, recent investigations have revealed some epibiotic bacteria, but no study has described the bacterial community associated with the gill and intestine. In this study, the microbiota attached to the gill and intestine of the hydrothermal vent crab Austinograea sp. and two shallow-water crab species (Eriocheir sinensis and Portunus trituberculatus) were compared by high-throughput sequencing of 16S rDNA genes. The highest and lowest diversity in bacterial communities were observed in the gill and intestine of Austinograea sp., respectively. Non-metric multidimensional scaling (NMDS) analysis indicated that Austinograea sp. harbored a distinct microbial community. Operational taxonomic units (OTUs) for phylum Fusobacteria, class Epsilonproteobacteria, and genera Leucothrix, Polaribacter, Fusibacter, etc. were dominant in Austinograea sp. Of these, Leucothrix, Sulfurospirillum, and Arcobacter may be involved in oxidizing reduced sulfur compounds and sulfur metabolism; Marinomonas, Polaribacter adapted to the low temperature, and Fusibacter and Psychrilyobacter may survive well under hypoxic conditions. Bacteria commonly present in seawater were dominant in the gill, whereas anaerobic bacteria showed strikingly high abundance in the intestine. Interestingly, Firmicutes and Epsilonproteobacteria may complement each other in Austinograea sp., forming an internal environment. The diversified microbial community of Austinograea sp. reveals adaptation to the hydrothermal vent environment.
DOI10.1371/journal.pone.0187842
Indexed BySCI
Language英语
WOS IDWOS:000414769900086
Citation statistics
Document Type期刊论文
Version出版稿
Identifierhttp://ir.qdio.ac.cn/handle/337002/143067
Collection实验海洋生物学重点实验室
Affiliation1.Chinese Acad Sci, Inst Oceanol, Key Lab Expt Marine Biol, Qingdao, Peoples R China
2.Chinese Acad Sci, Inst Oceanol, Key Lab Marine Ecol & Environm Sci, Qingdao, Peoples R China
3.Chinese Acad Sci, Inst Oceanol, Deep Sea Res Ctr, Qingdao, Peoples R China
4.Qingdao Natl Lab Marine Sci & Technol, Lab Marine Biol & Biotechnol, Qingdao, Peoples R China
5.Natl & Local Joint Engn Lab Ecol Mariculture, Qingdao, Peoples R China
First Author AffilicationInstitute of Oceanology, Chinese Academy of Sciences
Recommended Citation
GB/T 7714
Zhang, Na,Song, Chengwen,Wang, Minxiao,et al. Diversity and characterization of bacteria associated with the deep-sea hydrothermal vent crab Austinograea sp comparing with those of two shallow-water crabs by 16S ribosomal DNA analysis[J]. PLOS ONE,2017,12(11).
APA Zhang, Na,Song, Chengwen,Wang, Minxiao,Liu, Yuan,Hui, Min,&Cui, Zhaoxia.(2017).Diversity and characterization of bacteria associated with the deep-sea hydrothermal vent crab Austinograea sp comparing with those of two shallow-water crabs by 16S ribosomal DNA analysis.PLOS ONE,12(11).
MLA Zhang, Na,et al."Diversity and characterization of bacteria associated with the deep-sea hydrothermal vent crab Austinograea sp comparing with those of two shallow-water crabs by 16S ribosomal DNA analysis".PLOS ONE 12.11(2017).
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