IOCAS-IR  > 海洋地质与环境重点实验室
Novosphingobium profundi sp nov isolated from a deep-sea seamount
Zhang, De-Chao1,2; Liu, Yan-Xia1; Huang, Hai-Jun1
2017
Source PublicationANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY
Volume110Issue:1Pages:19-25
SubtypeArticle
AbstractA marine bacterial strain, F72(T), was isolated from a solitary scleractinian coral, collected in Yap seamounts in the Pacific Ocean. Strain F72(T) is a Gram-negative, light-yellow-pigmented, motile, rod-shaped bacterium. Phylogenetic analysis based on 16S rRNA gene sequences showed that strain F72(T) is related to the genus Novosphingobium and has high 16S rRNA gene sequence similarities with the type strains of Novosphingobium pentaromativorans US6-1(T) (97.7 %), Novosphingobium panipatense SM16(T) (97.6 %), Novosphingobium mathurense SM117(T) (97.2 %) and Novosphingobium barchaimii LL02(T) (97.1 %). Ubiquinone Q-10 was detected as the dominant quinone. The predominant cellular fatty acids were C-18:1 omega 7c and C-17:1 omega 6c. The genomic DNA G+C content of strain F72(T) was 63.4 mol %. The polar lipids profile contained phosphatidylglycerol, diphosphatidylglycerol, phosphatidylethanolamine, phosphatidylmethylethanolamine, phosphatidylcholine, sphingoglycolipid and one uncharacterized lipid. Strain F72(T) shared DNA relatedness of 25 % with N. pentaromativorans JCM 12182(T), 31 % with N. panipatense DSM 22890(T), 21 % with N. mathurense DSM 23374(T) and 26 % with N. barchaimii DSM 25411(T). Combined data from phenotypic, phylogenetic and DNA-DNA relatedness studies demonstrated that the strain F72(T) is a representative of a novel species of the genus Novosphingobium, for which we propose the name Novosphingobium profundi sp. nov. (type strain F72(T) = KACC 18566(T) = CGMCC 1.15390(T)).
KeywordNovoSphingobium Profundi Sp Nov. Yap Seamounts Coral
DOI10.1007/s10482-016-0769-3
Indexed BySCI
Language英语
WOS IDWOS:000392184800003
Citation statistics
Cited Times:7[WOS]   [WOS Record]     [Related Records in WOS]
Document Type期刊论文
Version出版稿
Identifierhttp://ir.qdio.ac.cn/handle/337002/136273
Collection海洋地质与环境重点实验室
Affiliation1.Chinese Acad Sci, Inst Oceanol, Qingdao 266071, Peoples R China
2.Univ Chinese Acad Sci, Beijing 100049, Peoples R China
Recommended Citation
GB/T 7714
Zhang, De-Chao,Liu, Yan-Xia,Huang, Hai-Jun. Novosphingobium profundi sp nov isolated from a deep-sea seamount[J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,2017,110(1):19-25.
APA Zhang, De-Chao,Liu, Yan-Xia,&Huang, Hai-Jun.(2017).Novosphingobium profundi sp nov isolated from a deep-sea seamount.ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY,110(1),19-25.
MLA Zhang, De-Chao,et al."Novosphingobium profundi sp nov isolated from a deep-sea seamount".ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY 110.1(2017):19-25.
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