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Mitochondrial genome of Sargassum thunbergii: conservation and variability of mitogenomes within the subgenus Bactrophycus
Liu, Feng1,2; Pang, Shaojun1
2016
发表期刊MITOCHONDRIAL DNA
卷号27期号:5页码:3186-3188
文章类型Article
摘要Sargassum thunbergii (Mertens ex Roth) Kuntze is a common brown seaweed in rocky intertidal zones along the northwestern Pacific coast. In the present study, we sequenced and annotated the complete mitochondrial genome of S. thunbergii. The circular S. thunbergii mitogenome is 34,748 bp in size and contains the same set of 65 genes as other mtDNAs in four Sargassum species. The genome organization including the gene order, overlapping regions between genes and the total length of inter-genic regions is highly similar to the other Bactrophycus species. The comparison by genome scale alignment displays only minor differences in gene lengths, but higher divergence in inter-genic spacer regions, especially the cox3-atp6 inter-genic spacer. Mitochondrial phylogenomics suggests that S. thunbergii is tightly combined with Sargassum muticum and Sargassum hemiphyllum forming the sect. Teretia clade with strong support values (NJ/ML, 100%). The present data illustrate that the complete mtDNAs could provide a more complete assessment of their phylogenetic relationships.
关键词Bactrophycus Brown Seaweed Mitochondrial Genome Mitogenome Sargassum Thunbergii
DOI10.3109/19401736.2015.1007328
收录类别SCI
语种英语
WOS记录号WOS:000377956700054
引用统计
被引频次:4[WOS]   [WOS记录]     [WOS相关记录]
文献类型期刊论文
版本出版稿
条目标识符http://ir.qdio.ac.cn/handle/337002/130990
专题实验海洋生物学重点实验室
作者单位1.Chinese Acad Sci, Key Lab Expt Marine Biol, Inst Oceanol, Qingdao 266071, Peoples R China
2.Huaihai Inst Technol, Key Lab Marine Biotechnol Jiangsu Prov, Lianyungang, Peoples R China
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Liu, Feng,Pang, Shaojun. Mitochondrial genome of Sargassum thunbergii: conservation and variability of mitogenomes within the subgenus Bactrophycus[J]. MITOCHONDRIAL DNA,2016,27(5):3186-3188.
APA Liu, Feng,&Pang, Shaojun.(2016).Mitochondrial genome of Sargassum thunbergii: conservation and variability of mitogenomes within the subgenus Bactrophycus.MITOCHONDRIAL DNA,27(5),3186-3188.
MLA Liu, Feng,et al."Mitochondrial genome of Sargassum thunbergii: conservation and variability of mitogenomes within the subgenus Bactrophycus".MITOCHONDRIAL DNA 27.5(2016):3186-3188.
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