Species delineation in Pampus (Perciformes) and the phylogenetic status of the Stromateoidei based on mitogenomics

doi:10.1007/s11033-010-0207-y

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	Species delineation in Pampus (Perciformes) and the phylogenetic status of the Stromateoidei based on mitogenomics
	Cui, Zhaoxia 3; Liu, Yuan 2,3; Li, Chi Pang 1; Chu, Ka Hou 1
	2011-02-01
发表期刊	MOLECULAR BIOLOGY REPORTS
ISSN	0301-4851
卷号	38 期号:2 页码:1103-1114
文章类型	Article
摘要	Recent studies on the mitochondrial genome have suggested that the duplications of tRNA and tandem repeats in the control region are important changes that are related to species diversity. This paper reports the study of mitogenomes from five Pampus (Perciformes, Stromateidae) species with very similar morphology. A duplicated tRNA (Met) gene in the tRNA-IQM region is present in Pampus sp. and P. punctatissimus. In the conserved sequence blocks of the control region, a duplicated CSB3 and promoter are found in Pampus sp. but are absent in P. minor. Moreover, a duplicated TAS is found in P. punctatissimus and P. chinensis. Based on the complete mitogenome sequence of Pampus sp., the first sequence reported from Stromateidae and the longest (17,694 bp) among the Perciformes mitogenomes, we conducted phylogenetic analysis to show that Stromateoidei and Scombroidei are more closely related to each other than to other Perciformes suborders. However, we reject the reciprocal monophyly of these two suborders.; Recent studies on the mitochondrial genome have suggested that the duplications of tRNA and tandem repeats in the control region are important changes that are related to species diversity. This paper reports the study of mitogenomes from five Pampus (Perciformes, Stromateidae) species with very similar morphology. A duplicated tRNA (Met) gene in the tRNA-IQM region is present in Pampus sp. and P. punctatissimus. In the conserved sequence blocks of the control region, a duplicated CSB3 and promoter are found in Pampus sp. but are absent in P. minor. Moreover, a duplicated TAS is found in P. punctatissimus and P. chinensis. Based on the complete mitogenome sequence of Pampus sp., the first sequence reported from Stromateidae and the longest (17,694 bp) among the Perciformes mitogenomes, we conducted phylogenetic analysis to show that Stromateoidei and Scombroidei are more closely related to each other than to other Perciformes suborders. However, we reject the reciprocal monophyly of these two suborders.
关键词	Stromateidae Mitochondrial Dna Gene Duplication Genomic Diversity
学科领域	Biochemistry & Molecular Biology
DOI	10.1007/s11033-010-0207-y
URL	查看原文
收录类别	SCI
语种	英语
WOS记录号	WOS:000286472600052
引用统计	被引频次：13[WOS] [WOS记录] [WOS相关记录]
文献类型	期刊论文
条目标识符	http://ir.qdio.ac.cn/handle/337002/11947
专题	实验海洋生物学重点实验室
作者单位	1.Chinese Univ Hong Kong, Dept Biol, Simon FS Li Marine Sci Lab, Hong Kong, Hong Kong, Peoples R China 2.Chinese Acad Sci, Grad Univ, Beijing 100039, Peoples R China 3.Chinese Acad Sci, Inst Oceanol, EMBL, Qingdao 266071, Peoples R China
第一作者单位	中国科学院海洋研究所
推荐引用方式 GB/T 7714	Cui, Zhaoxia,Liu, Yuan,Li, Chi Pang,et al. Species delineation in Pampus (Perciformes) and the phylogenetic status of the Stromateoidei based on mitogenomics[J]. MOLECULAR BIOLOGY REPORTS,2011,38(2):1103-1114.
APA	Cui, Zhaoxia,Liu, Yuan,Li, Chi Pang,&Chu, Ka Hou.(2011).Species delineation in Pampus (Perciformes) and the phylogenetic status of the Stromateoidei based on mitogenomics.MOLECULAR BIOLOGY REPORTS,38(2),1103-1114.
MLA	Cui, Zhaoxia,et al."Species delineation in Pampus (Perciformes) and the phylogenetic status of the Stromateoidei based on mitogenomics".MOLECULAR BIOLOGY REPORTS 38.2(2011):1103-1114.

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